Copy Variants

Copy variants should be passed to the IPR python adapter in the main report content JSON.

{
    "copyVariants": [
        // variants
    ]

}

Each variant is an object which may contain any of the following fields

Field	Type	Example	Description
gene (required)	string	"KRAS"	the gene name
kbCategory (required)	string?		the graphkb copy variant vocabulary term this variant belongs to. By default only amplifications and deep deletions are matched
chromosomeBand	string	"X:p12.2"
cna	number?	1.22	The copy number alteration (CNA) ratio
copyChange	integer?	-2	the ploidy corrected copy change value
end	integer?		the genomic end position of the copy segment this gene copy number was called from
log2Cna	number?
lohState	string	"HET"	the loss-of-heterozygosity category for this gene region
start	integer?		the genomic start position of the copy segment this gene copy number was called from