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| static const unsigned | NO_ID = 1 |
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| static const unsigned | BX = 2 |
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| static const unsigned | SEQ = 4 |
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| static const unsigned | FILTER_IN = 8 |
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| static const unsigned | FILTER_OUT = 16 |
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| static const unsigned | SHORT_MODE = 32 |
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| static const unsigned | LONG_MODE = 64 |
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| static const unsigned | QUAL = 128 |
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| const unsigned btllib::Indexlr::Flag::BX = 2 |
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Include barcode along with minimizer information.
| const unsigned btllib::Indexlr::Flag::FILTER_IN = 8 |
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Only include minimizers found in the first Bloom filter argument.
| const unsigned btllib::Indexlr::Flag::FILTER_OUT = 16 |
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Filter out minimizers found in a Bloom filter argument. If FILTER_IN is NOT enabled, then use the first Bloom filter argument. If both FILTER_IN and FILTER_OUT flags are enabled, FILTER_IN uses the first Bloom filter argument and FILTER_OUT uses the second.
| const unsigned btllib::Indexlr::Flag::LONG_MODE = 64 |
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Optimizes performance for long sequences (approx. >5kbp)
| const unsigned btllib::Indexlr::Flag::NO_ID = 1 |
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Do not include read ID information. May improve performance.
| const unsigned btllib::Indexlr::Flag::QUAL = 128 |
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Include read sequence Phred score along with minimizer information.
| const unsigned btllib::Indexlr::Flag::SEQ = 4 |
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static |
Include read sequence along with minimizer information.
| const unsigned btllib::Indexlr::Flag::SHORT_MODE = 32 |
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static |
Optimizes performance for short sequences (approx. <=5kbp)
The documentation for this struct was generated from the following file:
1.8.5
