btllib::RandSeq Class Reference

Public Types
enum class	SeqType { DNA , RNA , PROTEIN }
enum class	Masking { NONE , SOFT , HARD }

Public Member Functions
	RandSeq (SeqType type, Masking masking=Masking::NONE)
void	set_seed (unsigned long seed)
std::string	generate (size_t length)

Constructor & Destructor Documentation

RandSeq()

btllib::RandSeq::RandSeq	(	SeqType	type,
		Masking	masking = Masking::NONE )

Construct a random sequence generator object.

Parameters

type	Sequence type (DNA, RNA, or protein)
masking	If set to SOFT, lower-case values will also be generated. If HARD, the sequences will include N/X positions.

Member Function Documentation

generate()

std::string btllib::RandSeq::generate

(

size_t

length

)

Generate a new random sequence.

Parameters

length

Sequence length

set_seed()

void btllib::RandSeq::set_seed

(

unsigned long

seed

)

Set the seed of the random string generator

Parameters

seed	Random generator seed

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The documentation for this class was generated from the following file:

• include/btllib/randseq.hpp