btllib
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This is the complete list of members for btllib::Indexlr, including all inherited members.
begin() | btllib::Indexlr | inline |
close() noexcept (defined in btllib::Indexlr) | btllib::Indexlr | inline |
end() (defined in btllib::Indexlr) | btllib::Indexlr | inline |
filter_in() const (defined in btllib::Indexlr) | btllib::Indexlr | inline |
filter_out() const (defined in btllib::Indexlr) | btllib::Indexlr | inline |
HashedKmer typedef (defined in btllib::Indexlr) | btllib::Indexlr | |
Indexlr(std::string seqfile, size_t k, size_t w, unsigned flags=0, unsigned threads=5, bool verbose=false, const btllib::BloomFilter &bf1=Indexlr::dummy_bf(), const btllib::BloomFilter &bf2=Indexlr::dummy_bf()) | btllib::Indexlr | inline |
Indexlr(std::string seqfile, size_t k, size_t w, size_t q, unsigned flags=0, unsigned threads=5, bool verbose=false, const btllib::BloomFilter &bf1=Indexlr::dummy_bf(), const btllib::BloomFilter &bf2=Indexlr::dummy_bf()) (defined in btllib::Indexlr) | btllib::Indexlr | inline |
long_mode() const (defined in btllib::Indexlr) | btllib::Indexlr | inline |
MAX_SIMULTANEOUS_INDEXLRS (defined in btllib::Indexlr) | btllib::Indexlr | static |
output_bx() const (defined in btllib::Indexlr) | btllib::Indexlr | inline |
output_id() const (defined in btllib::Indexlr) | btllib::Indexlr | inline |
output_qual() const (defined in btllib::Indexlr) | btllib::Indexlr | inline |
output_seq() const (defined in btllib::Indexlr) | btllib::Indexlr | inline |
read() | btllib::Indexlr | inline |
short_mode() const (defined in btllib::Indexlr) | btllib::Indexlr | inline |
~Indexlr() (defined in btllib::Indexlr) | btllib::Indexlr | inline |